Validating: /190129.zarr/zarr.json
Using version 0.5. Using schema: /spec-rfc2/latest/schemas/plate.schema✓
{
- attributes: {
- ome: {
- "version": "0.5" ,
- _creator: { ... } , // 3 items
- plate: { ... } // 5 items
- "zarr_format": 3 ,
- "node_type": "group"
RO-Crate metadata
- License: ✓ https://creativecommons.org/licenses/by/4.0/
- Name: ✓ idr0090 Ashdown Malaria
- Description: ✓ A machine learning approach to define antimalarial drug action from heterogeneous cell-based screens
- Organism: ✓ NCBI:txid36329 Plasmodium falciparum 3D7
- Imaging method: ✓ obo:FBbi_00000246 fluorescence microscopy
ro-crate-metadata.json
{
"@context": [
"https://w3id.org/ro/crate/1.1/context",
{
"organism_classification": "https://schema.org/taxonomicRange",
"BioChemEntity": "https://schema.org/BioChemEntity",
"channel": "https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Channel",
"obo": "http://purl.obolibrary.org/obo/",
"FBcv": "http://ontobee.org/ontology/FBcv/",
"acquisiton_method": {
"@reverse": "https://schema.org/result",
"@type": "@id"
},
"biological_entity": "https://schema.org/about",
"biosample": "http://purl.obolibrary.org/obo/OBI_0002648",
"preparation_method": "https://www.wikidata.org/wiki/Property:P1537",
"specimen": "http://purl.obolibrary.org/obo/HSO_0000308"
}
],
"@graph": [
{
"@id": "./",
"@type": "Dataset",
"name": "idr0090 Ashdown Malaria",
"description": "A machine learning approach to define antimalarial drug action from heterogeneous cell-based screens",
"license": "https://creativecommons.org/licenses/by/4.0/",
"resultOf": {
"@id": "#d75a1cc1-948c-4c3e-b37c-a57db665cca4"
}
},
{
"@id": "ro-crate-metadata.json",
"@type": "CreativeWork",
"conformsTo": {
"@id": "https://w3id.org/ro/crate/1.1"
},
"about": {
"@id": "./"
}
},
{
"@id": "#4369b565-ab46-4684-ba39-6ec4077d13e3",
"@type": "biosample",
"organism_classification": {
"@id": "NCBI:txid36329"
}
},
{
"@id": "#3d360fd7-d5d2-404b-90ee-a93c0172f683",
"@type": "specimen",
"biosample": {
"@id": "#4369b565-ab46-4684-ba39-6ec4077d13e3"
}
},
{
"@id": "#d75a1cc1-948c-4c3e-b37c-a57db665cca4",
"@type": "image_acquisition",
"fbbi_id": {
"@id": "obo:FBbi_00000246"
},
"specimen": {
"@id": "#3d360fd7-d5d2-404b-90ee-a93c0172f683"
}
}
]
}